Research areas

  1. De novo sequencing of heparan sulfate oligosaccharides by electron-activated dissociation

    Huang, Y., Yu, X., Mao, Y., Costello, C. E., Zaia, J. & Lin, C., 17 Dec 2013, In: Analytical Chemistry. 85, 24, p. 11979-86 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. De novo sequencing of antimicrobial peptides isolated from the venom glands of the wolf spider Lycosa singoriensis

    Budnik, B. A., Olsen, Jesper Velgaard, Egorov, T. A., Anisimova, V. E., Galkina, T. G., Musolyamov, A. K., Grishin, E. V. & Zubarev, R. A., 2004, In: Journal of Mass Spectrometry. 39, 2, p. 193-201 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    De novo production of benzyl glucosinolate in Escherichia coli

    Petersen, A., Crocoll, C. & Halkier, Barbara Ann, 1 Jul 2019, In: Metabolic Engineering. 54, p. 24-34

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. De novo peptide sequencing and identification with precision mass spectrometry

    Frank, A. M., Savitski, M. M., Nielsen, Michael Lund, Zubarev, R. A. & Pevzner, P. A., 2007, In: Journal of Proteome Research. 6, 1, p. 114-123 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    De novo nonsense mutations in ASXL1 cause Bohring-Opitz syndrome

    Hoischen, A., van Bon, B. W. M., Rodríguez-Santiago, B., Gilissen, C., Vissers, L. E. L. M., de Vries, P., Janssen, I., van Lier, B., Hastings, R., Smithson, S. F., Newbury-Ecob, R., Kjærgaard, S., Goodship, J., McGowan, R., Bartholdi, D., Rauch, A., Peippo, M., Cobben, J. M., Wieczorek, D., Gillessen-Kaesbach, G. & 3 others, Veltman, J. A., Brunner, H. G. & de Vries, B. B. B. A., 2011, In: Nature Genetics. 43, 8, p. 729-31 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. De novo mutations in familial adenomatous polyposis (FAP)

    Ripa, Rasmus Sejersten, Bisgaard, M. L., Bülow, S. & Nielsen, F. C., Oct 2002, In: European Journal of Human Genetics. 10, 10, p. 631-7 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    De novo mutations in MSL3 cause an X-linked syndrome marked by impaired histone H4 lysine 16 acetylation

    Basilicata, M. F., Bruel, A. L., Semplicio, G., Valsecchi, C. I. K., Aktaş, T., Duffourd, Y., Rumpf, T., Morton, J., Bache, I., Szymanski, W. G., Gilissen, C., Vanakker, O., Õunap, K., Mittler, G., van der Burgt, I., El Chehadeh, S., Cho, M. T., Pfundt, R., Tan, T. Y., Kirchhoff, M. & 21 others, Menten, B., Vergult, S., Lindstrom, K., Reis, A., Johnson, D. S., Fryer, A., McKay, V., Fisher, R. B., Thauvin-Robinet, C., Francis, D., Roscioli, T., Pajusalu, S., Radtke, K., Ganesh, J., Brunner, H. G., Wilson, M., Faivre, L., Kalscheuer, V. M., Thevenon, J., Akhtar, A. & DDD Study, D. S., 2018, In: Nature Genetics. 50, 10, p. 1442-1451 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    De novo mutations in ATP1A3 cause alternating hemiplegia of childhood

    Heinzen, E. L., Swoboda, K. J., Hitomi, Y., Gurrieri, F., Nicole, S., de Vries, B., Tiziano, F. D., Fontaine, B., Walley, N. M., Heavin, S., Panagiotakaki, E., Fiori, S., Abiusi, E., Di Pietro, L., Sweney, M. T., Newcomb, T. M., Viollet, L., Huff, C., Jorde, L. B., Reyna, S. P. & 23 others, Murphy, K. J., Shianna, K. V., Gumbs, C. E., Little, L., Silver, K., Ptáček, L. J., Haan, J., Ferrari, M. D., Bye, A. M., Herkes, G. K., Whitelaw, C. M., Webb, D., Lynch, B. J., Uldall, P., King, M. D., Scheffer, I. E., Neri, G., Arzimanoglou, A., van den Maagdenberg, A. M. J. M., Sisodiya, S. M., Mikati, M. A., Goldstein, D. B. & European Alternating Hemiplegia of Childhood (AHC) Genetics Consortium, E. A. H. O. C. (. G. C., 2012, In: Nature Genetics. 44, 9, p. 1030-4 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    De novo mutation in the dopamine transporter gene associates dopamine dysfunction with autism spectrum disorder

    Hamilton, P. J., Campbell, N. G., Sharma, S., Erreger, K., Herborg, Freja, Saunders, C., Belovich, A. N., NIH ARRA Autism Sequencing Consortium, N. A. A. S. C., Sahai, M. A., Cook, E. H., Gether, Ulrik, McHaourab, H. S., Matthies, H. J. G., Sutcliffe, J. S. & Galli, A., Dec 2013, In: Molecular Psychiatry. 18, 12, p. 1315-23 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    De novo microdeletions of chromosome 6q14.1-q14.3 and 6q12.1-q14.1 in two patients with intellectual disability - further delineation of the 6q14 microdeletion syndrome and review of the literature

    Becker, K., Di Donato, N., Holder-Espinasse, M., Andrieux, J., Cuisset, J., Vallée, L., Plessis, G., Jean, N., Delobel, B., Thuresson, A., Annerén, G., Ravn, K., Tümer, Asuman Zeynep, Tinschert, S., Schrock, E., Jønch, A. E. & Hackmann, K., Aug 2012, In: European Journal of Medical Genetics. 55, 8-9, p. 490-497 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. De novo macrocyclic peptides that specifically modulate Lys48-linked ubiquitin chains

    Nawatha, M., Rogers, Joseph Matthew, Bonn, S. M., Livneh, I., Lemma, B., Mali, S. M., Vamisetti, G. B., Sun, H., Bercovich, B., Huang, Y., Ciechanover, A., Fushman, D., Suga, H. & Brik, A., 1 Jul 2019, In: Nature Chemistry. 11, 7, p. 644-652 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    De novo indol-3-ylmethyl glucosinolate biosynthesis, and not long-distance transport, contributes to defence of Arabidopsis against powdery mildew

    Hunziker, P., Ghareeb, H., Wagenknecht, L., Crocoll, C., Halkier, Barbara Ann, Lipka, V. & Schulz, Alexander, 2020, In: Plant, Cell and Environment. 43, 6, p. 1571-1583 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. De novo identification of cell-type specific antibody-antigen pairs by phage display subtraction. Isolation of a human single chain antibody fragment against human keratin 14

    Stausbøl-Grøn, B., Jensen, Kim Bak, Jensen, K. H., Jensen , M. Ø. & Clark, B. F., May 2001, In: European Journal of Biochemistry. 268, 10, p. 3099-107 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published
  15. Published

    De novo electrocardiographic abnormalities in persons living with HIV

    Knudsen, A. D., Graff, C., Nielsen, J. B., Thomsen, M. T., Høgh, J., Benfield, Thomas, Gerstoft, Jan, Køber, Lars Valeur, Kofoed, Klaus Fuglsang & Nielsen, Susanne Dam, 2021, In: Scientific Reports. 11, 1, 20750.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    De novo designed triple-helix bundle proteins on a carbohydrate template

    Malik, L., Nygaard, J., Høiberg-Nielsen, R., Christensen, Niels Johan, Thulstrup, Peter Waaben, Arleth, Lise & Jensen, Knud Jørgen, 2010, In: Journal of Peptide Science. S2

    Research output: Contribution to journalConference abstract in journalResearch

  17. Published

    De novo design of novel cyclic antimicrobial peptides

    Oddo, A., Frimodt-Moller, N. & Hansen, Paul Robert, 7 Jul 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  18. Published

    De novo design of high-affinity binders of bioactive helical peptides

    Vázquez Torres, S., Leung, P. J. Y., Venkatesh, P., Lutz, I. D., Hink, F., Huynh, H. H., Becker, J., Yeh, A. H. W., Juergens, D., Bennett, N. R., Hoofnagle, A. N., Huang, E., MacCoss, M. J., Expòsit, M., Lee, G. R., Bera, A. K., Kang, A., De La Cruz, J., Levine, P. M., Li, X. & 10 others, Lamb, M., Gerben, S. R., Murray, A., Heine, P., Korkmaz, E. N., Nivala, J., Stewart, L., Watson, J. L., Rogers, Joseph Matthew & Baker, D., 2024, In: Nature. 626, 7998, p. 435-442

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    De novo deposition of laminin-positive basement membrane in vitro by normal hepatocytes and during hepatocarcinogenesis.

    Albrechtsen, Reidar, Wewer, Ulla M. & Thorgeirsson, S. S., 1988, In: Hepatology. 8, 3, p. 538-46 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    De novo biosynthesis of vanillin in fission yeast (Schizosaccharomyces pombe) and baker's yeast (Saccharomyces cerevisiae)

    Hansen, E. H., Møller, Birger Lindberg, Kock, G. R., Bünner, C. M., Kristensen, C., Jensen, O. R., Okkels, F. T., Olsen, C. E., Motawie, Mohammed Saddik & Hansen, J., 2009, In: Applied and Environmental Microbiology. 75, 9, p. 2765-2774 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    De novo assembly of human genomes with massively parallel short read sequencing

    Li, R., Zhu, H., Ruan, J., Qian, W., Fang, X., Shi, Z., Li, Y., Li, S., Shan, G., Kristiansen, Karsten, Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 2, p. 265-72 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    De novo Calculation of the NMR Solution Structure of the R6 Human Insulin Hexamer

    Chang, X., O'Donoghue, S. I., Nilges, M. & Led, J. J., 1998, Magnetic Resonance and Related Phenomena. Vol. 1 ed. Technische Universität Berlin, p. 130-131

    Research output: Chapter in Book/Report/Conference proceedingReport chapterResearch

  23. Published

    De nova stella i videnskabshistorisk perspektiv

    Kragh, Helge Stjernholm, Nov 2022, De Nova Stella: Tycho Brahes Bog om den Nye Stjerne (1573). Dorch, B. & Zeeberg, P. (eds.). Odense: Syddansk Universitetsforlag, p. 11-18

    Research output: Chapter in Book/Report/Conference proceedingBook chapterCommunication

  24. Published

    De nordiske velfærdsmodeller og globaliseringen: Temanummer af Økonomi & Politik

    Marcussen, Martin (ed.), 2012, Kbh.: Djøf Forlag. 126 p.

    Research output: Book/ReportAnthologyResearchpeer-review

  25. Published

    De nordiske statskirker og velfærdsstaten

    Knudsen, Tim, 2003, 13 historier om den danske velfærdsstat. Petersen, K. (ed.). Odense: Syddansk Universitetsforlag, p. 37-47

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch