Research areas

  1. Accepted/In press

    Systematic Strategy for Developing Glycosyltransferase Inhibitors: Diversity-Oriented Synthesis of FUT8 Inhibitors

    Manabe, Y., Hizume, K., Takakura, Y., Takamatsu, S., Miyoshi, E., Kamad, Y., Hurtado-Guerrer, R. & Fukase, K., 2024, (Accepted/In press) In: Synlett.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Systematic Study of Drosophila MicroRNA Functions Using a Collection of Targeted Knockout Mutations

    Chen, Y., Song, S., Weng, R., Verma, P., Kugler, J., Buescher, M., Rouam, S. & Cohen, S. M., 22 Dec 2014, In: Developmental Cell. 31, 6, p. 784-800 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Systematic Uncertainties in Black Hole Masses Determined from Single Epoch Spectra

    Denney, K. D., Peterson, B. M., Dietrich, M., Vestergaard, Marianne & Bentz, M. C., 20 Oct 2008, In: Astrophysical Journal. 692, 1, 246.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Systematic account of animal poisonings in Germany, 2012-2015

    McFarland, S. E., Mischke, R. H., Hopster-Iversen, Charlotte, von Krueger, X., Ammer, H., Potschka, H., Stuerer, A., Begemann, K., Desel, H. & Greiner, M., 2017, In: Veterinary Record. 180, 13, 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Systematic analyses of regulatory variants in DNase I hypersensitive sites identified two novel lung cancer susceptibility loci

    Dai, J., Li, Z., Amos, C. I., Hung, R. J., Tardon, A., Andrew, A. S., Chen, C., Christiani, D. C., Albanes, D., van der Heijden, E. H. F. M., Duell, E. J., Rennert, G., Mckay, J. D., Yuan, J-M., Field, J. K., Manjer, J., Grankvist, K., Le Marchand, L., Teare, M. D., Schabath, M. B. & 17 others, Aldrich, M. C., Tsao, M., Lazarus, P., Lam, S., Bojesen, Stig Egil, Arnold, S., Wu, X., Haugen, A., Janout, V., Johansson, M., Brhane, Y., Fernandez-Somoano, A., Kiemeney, L. A., Davies, M. P. A., Zienolddiny, S., Hu, Z. & Shen, H., Mar 2019, In: Carcinogenesis. 40, 3, p. 432-440 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. E-pub ahead of print

    Systematic analysis and characterization of long non-coding RNA genes in inflammatory bowel disease

    Velissari, R., Ilieva, M., Dao, J., Miller, H. E., Madsen, J. H., Gorodkin, Jan, Aikawa, M., Ishii, H. & Uchida, S., 2024, (E-pub ahead of print) In: Briefings in Functional Genomics.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Systematic analysis of adaptations in aerobic capacity and submaximal energy metabolism provides a unique insight into determinants of human aerobic performance

    Vollaard, N. B. J., Constantin-Teodosiu, D., Fredriksson, K., Rooyackers, O., Jansson, E., Greenhaff, P. L., Timmons, J. A. & Sundberg, C. J., 2009, In: Journal of Applied Physiology. 106, 5, p. 1479-86 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Systematic analysis of complex genetic interactions

    Kuzmin, E., VanderSluis, B., Wang, W., Tan, G., Deshpande, R., Chen, Y., Usaj, M., Balint, A., Usaj, M. M., Van Leeuwen, J., Koch, E. N., Pons, C., Dagilis, A. J., Pryszlak, M., Wang, J. Z. Y., Hanchard, J., Riggi, M., Xu, K., Heydari, H., Luis, B. J. S. & 12 others, Shuteriqi, E., Zhu, H., Van Dyk, N., Sharifpoor, S., Costanzo, M., Loewith, R., Caudy, A., Bolnick, D., Brown, G. W., Andrews, B. J., Boone, C. & Myers, C. L., 2018, In: Science. 360, 6386, aao1729.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Systematic analysis of deficits in visual attention

    Duncan, J., Bundesen, C., Olson, A., Humphreys, G., Chavda, S. & Shibuya, H., 1999, In: Journal of Experimental Psychology: General. p. 450-478 29 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Systematic analysis of deficits in visual attention

    Duncan, J., Bundesen, C., Olson, A., Humphreys, G., Chavda, S. & Shibuya, H., 1999, In: Journal of Experimental Psychology: General. p. 450-478 29 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Systematic and biogeographic review of the Staphylinini rove beetles of Lord Howe Island with description of new species and taxonomic changes (Coleoptera, Staphylinidae)

    Shaw, J. J. & Solodovnikov, Alexey, 2016, In: ZooKeys. 638, p. 1-25 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Systematic and luminal influences on the perinatal development of the gut

    Trahair, J. F. & Sangild, Per Torp, 1997, In: Equine Veterinary Journal. 24, p. 40-50 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Systematic approach for assessment of imaging features in chronic pancreatitis: a feasibility and validation study from the Scandinavian Baltic Pancreatic Club (SBPC) database

    Lisitskaya, M. V., Olesen, S. S., Svarc, P., Ebrahim, M., Jensen, A. B., Nøjgaard, C., Nørregaard, Peter, Drewes, A. M., Haldorsen, I. S., Engjom, T. & Frøkjær, J. B., May 2020, In: Abdominal Radiology. 45, 5, p. 1468-1480 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Systematic assessment of environmental risk factors for bipolar disorder: an umbrella review of systematic reviews and meta-analyses

    Bortolato, B., Köhler, C. A., Evangelou, E., León-Caballero, J., Solmi, M., Stubbs, B., Belbasis, L., Pacchiarotti, I., Kessing, Lars Vedel, Berk, M., Vieta, E. & Carvalho, A. F., Mar 2017, In: Bipolar Disorders. 19, 2, p. 84-96 13 p.

    Research output: Contribution to journalReviewResearchpeer-review

  15. Published

    Systematic assessment of physical function in adult patients across diagnoses

    Kristensen, Morten Tange, Dall, Christian Have, Aadahl, Mette & Suetta, Charlotte, 24 Oct 2022, In: Ugeskrift for Laeger. 184, 43

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies

    Wang, L., Sun, J., Wu, H., Liu, S., Wang, J., Wu, B., Huang, S., Li, N., Wang, J. & Zhang, X., Jan 2012, In: Journal of Biotechnology. 157, 1, p. 1-6 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Systematic association of genes to phenotypes by genome and literature mining

    Korbel, J. O., Doerks, T., Jensen, Lars Juhl, Perez-Iratxeta, C., Kaczanowski, S., Hooper, S. D., Andrade, M. A. & Bork, P., 2005, In: P L o S Biology (Online). 3, 5, p. e134

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Systematic cascade screening in the Danish Fabry Disease Centre: 20 years of a national single-centre experience

    Effraimidis, G., Rasmussen, Å. K., Dunoe, M., Hasholt, L. F., Wibrand, F., Sorensen, S. S., Lund, A. M., Kober, L., Bundgaard, H., Yazdanfard, P. D. W., Oturai, P., Larsen, V. A., de Abreu, V. H. F., Enevoldsen, L. H., Kristensen, T., Svenstrup, K., Bille, M. B., Arif, F., Mogensen, M., Klokker, M. & 3 others, Backer, Vibeke, Kistorp, Caroline Michaela Nervil & Feldt-Rasmussen, Ulla, 2022, In: PLoS ONE. 17, 11, e0277767.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Systematic case finding for tuberculosis in HIV-infected people who inject drugs: experience from Pakistan

    Tahseen, S., Shahnawaz, H., Riaz, U., Khanzada, F. M., Hussain, A., Aslam, W. & von Euler-Chelpin, My Catarina, 1 Feb 2018, In: International Journal of Tuberculosis and Lung Disease. 22, 2, p. 187-193

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Systematic characterisation of cellular localisation and expression profiles of proteins containing MHC ligands

    Juncker, A., Larsen, M. V., Weinhold, N., Nielsen, M., Brunak, S. & Lund, O., 2009, In: P L o S One. 4, 10, p. e7448

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Systematic characterisation of disease associated balanced chromosome rearrangements by FISH: cytogenetically and genetically anchored YACs identify microdeletions and candidate regions for mental retardation genes

    Wirth, J., Nothwang, H. G., van der Maarel, S., Menzel, C., Borck, G., Lopez-Pajares, I., Brøndum-Nielsen, K., Tommerup, Niels, Bugge, Merete, Ropers, H. H. & Haaf, T., 1999, In: Journal of Medical Genetics. 36, 4, p. 271-8 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Systematic characterization of the Herschel SPIRE Fourier Transform Spectrometer

    Hopwood, R., Polehampton, E. T., Valtchanov, I., Swinyard, B. M., Fulton, T., Lu, N., Marchili, N., van der Wiel, M. H. D., Benielli, D., Imhof, P., Baluteau, J. -., Pearson, C., Clements, D. L., Griffin, M. J., Lim, T. L., Makiwa, G., Naylor, D. A., Noble, G., Puga, E. & Spencer, L. D., 21 May 2015, In: Monthly Notices of the Royal Astronomical Society. 449, 3, p. 2274-2303

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Systematic clinical examinations in the new Danish dairy herd health program - experiences potentials and challenges

    Vaarst, M. & Klaas, I. C., 2010, XXVI World Buiatrics Congress 2010: WBC 2010 Congress Abstracts. Santiago, Chile, 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  24. Published

    Systematic clustering of transcription start site landscapes

    Zhao, X., Valen, E., Parker, B. J. & Sandelin, Albin Gustav, 2011, In: P L o S One. 6, 8, 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Systematic comparative evaluation of methods for investigating the TCRβ repertoire

    Liu, X., Zhang, W., Zeng, X., Zhang, R., Du, Y., Hong, X., Cao, H., Su, Z., Wang, C., Wu, J., Nie, C., Xu, X. & Kristiansen, Karsten, 2016, In: P L o S One. 11, 3, 18 p., e0152464.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Systematic comparison of transcriptomes of Caco-2 cells cultured under different cellular and physiological conditions

    Elzinga, Janneke, Grouls, M., Hooiveld, G. J. E. J., Zande, M. V. D., Smidt, H. & Bouwmeester, H., 2023, In: Archives of Toxicology. 97, p. 737–753

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Systematic derivation of amplitude equations and normal forms for dynamical systems

    Ipsen, M., Hynne, F. & Sørensen, P. G., 1998, In: Chaos. 8, p. 834-852

    Research output: Contribution to journalJournal articleResearch

  28. Systematic development and implementation of interventions to OPtimise Health Literacy and Access (Ophelia)

    Beauchamp, A., Batterham, R. W., Dodson, S., Astbury, B., Elsworth, G. R., McPhee, C., Jacobson, J., Buchbinder, R. & Osborne, Richard Harry, 3 Mar 2017, In: BMC Public Health. 17, p. 1-18 18 p., 230.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Systematic discovery of in vivo phosphorylation networks

    Linding, R., Jensen, L. J., Ostheimer, G. J., van Vugt, M. A. T. M., Jørgensen, C., Miron, I. M., Diella, F., Colwill, K., Taylor, L., Elder, K., Metalnikov, P., Nguyen, V., Pasculescu, A., Jin, J., Park, J. G., Samson, L. D., Woodgett, J. R., Russell, R. B., Bork, P., Yaffe, M. B. & 1 others, Pawson, T., 2007, In: Cell. 129, 7, p. 1415-26 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Systematic discovery of new recognition peptides mediating protein interaction networks

    Neduva, V., Linding, R., Su-Angrand, I., Stark, A., de Masi, F., Gibson, T. J., Lewis, J., Serrano, L. & Russell, R. B., Dec 2005, In: P L o S Biology (Online). 3, 12, p. e405 (2090-2099) 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Systematic dissection of transcriptional regulatory networks by genome-scale and single-cell CRISPR screens

    Lopes, R., Sprouffske, K., Sheng, C., Uijttewaal, E. C. H., Wesdorp, A. E., Dahinden, J., Wengert, S., Diaz-Miyar, J., Yildiz, U., Bleu, M., Apfel, V., Mermet-Meillon, F., Krese, R., Eder, M., Olsen, A. V., Hoppe, P., Knehr, J., Carbone, W., Cuttat, R., Waldt, A. & 8 others, Altorfer, M., Naumann, U., Weischenfeldt, Joachim Lütken, deWeck, A., Kauffmann, A., Roma, G., Schübeler, D. & Galli, G. G., 2021, In: Science Advances. 7, 27, eabf5733.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Systematic downloading and analysis of data from automated external defibrillators used in out-of-hospital cardiac arrest

    Hansen, M. B., Lippert, F. K., Rasmussen, L. S. & Nielsen, A. M., Dec 2014, In: Resuscitation. 85, 12, p. 1681-5 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Systematic drug sensitivity testing reveals synergistic growth inhibition by dasatinib or mTOR inhibitors with paclitaxel in ovarian granulosa cell tumor cells

    Haltia, U., Andersson, N., Yadav, B., Färkkilä, A., Kulesskiy, E., Kankainen, M., Tang, J., Bützow, R., Riska, A., Leminen, A., Heikinheimo, M., Kallioniemi, O., Unkila-Kallio, L., Wennerberg, Krister, Aittokallio, T. & Anttonen, M., Mar 2017, In: Gynecologic Oncology. 144, 3, p. 621-630 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Systematic effects in measurement of black hole masses by emission-line reverberation of active galactic nuclei: Eddington ratio and inclination

    Collin, S., Kawaguchi, T., Peterson, B. M. & Vestergaard, Marianne, 1 Sep 2006, In: Astronomy and Astrophysics. 456, 1, p. 75-90 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Systematic engineering pinpoints a versatile strategy for the expression of functional cytochrome P450 enzymes in Escherichia coli cell factories

    Poborsky, Michal, Crocoll, C., Motawie, Mohammed Saddik & Halkier, Barbara Ann, 2023, In: Microbial Cell Factories. 22, 10 p., 219.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Systematic errors on optical-SED stellar-mass estimates for galaxies across cosmic time and their impact on cosmology

    Paulino-Afonso, A., Gonzalez-Gaitan, S., Galbany, L., Mourao, A. M., Angus, Charlotte, Smith, M., Anderson, J. P., Lyman, J. D., Kuncarayakti, H. & Rodrigues, M., 21 Jun 2022, In: Astronomy & Astrophysics. 662, 12 p., A86.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Systematic evaluation of chromosome conformation capture assays

    Akgol Oksuz, B., Yang, L., Abraham, S., Venev, S. V., Krietenstein, Nils, Parsi, K. M., Ozadam, H., Oomen, M. E., Nand, A., Mao, H., Genga, R. M. J., Maehr, R., Rando, O. J., Mirny, L. A., Gibcus, J. H. & Dekker, J., Sep 2021, In: Nature Methods. 18, 9, p. 1046-1055 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Systematic evaluation of genes and genetic variants associated with type 1 diabetes susceptibility

    Ram, R., Mehta, M., Nguyen, T. Q., Larma, I., Boehm, B. O., Pociot, Flemming, Concannon, P. & Morahan, G., 2016, In: Journal of Immunology. 196, 7, p. 3043-3053 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Systematic evaluation of high level visual deficits and lesions in posterior cerebral artery stroke

    Robotham, Ro Julia, Rice, G. E., Leff, A. P., Ralph, M. A. L. & Starrfelt, Randi, 20 May 2022.

    Research output: Working paperPreprint

  40. Published

    Systematic evaluation of high-level visual deficits and lesions in posterior cerebral artery stroke

    Robotham, Ro Julia, Rice, G. E., Leff, A. P., Lambon Ralph, M. A. & Starrfelt, Randi, 1 Feb 2023, In: Brain Communications. 5, 2, 12 p., fcad050.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Systematic examination of the cardiopulmonary, urogenital, muscular and gastrointestinal parasites of the Eurasian otters (Lutra lutra) in Denmark, a protected species recovering from a dramatic decline

    Takeuchi-Storm, N., Al-Sabi, M. N. S., Chriel, M. & Enemark, H. L., 2021, In: Parasitology International. 84, 102418.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Systematic fast-track transition from oncological treatment to dyadic specialized palliative home care: DOMUS – a randomized clinical trial

    Nordly, M., Skov Benthien, K., Vadstrup, E. S., Kurita, G. P., von Heymann-Horan, A. B., von der Maase, H., Johansen, Christoffer, Timm, H., Kjellberg, J. & Sjøgren, P., 2019, In: Palliative Medicine. 33, 2, p. 135-149

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Systematic feedback in translation teaching

    Dollerup, C., 1994, Teaching Translation and Interpreting 2: Insights, Aims, Visions. Papers from the Second 'Language International' Conference, Elsinore, Denmark, 4-6 June 1993. Amsterdam: John Benjamins Publishing Company, p. 121-132

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  44. Published

    Systematic framework for control and eradication of endemic infectious diseases in cattle

    Nielsen, Liza Rosenbaum, Nielsen, Søren Saxmose & Houe, Hans, Jul 2016. 1 p.

    Research output: Contribution to conferencePosterResearchpeer-review

  45. Published

    Systematic framework for control and eradication of endemic infectious diseases in cattle

    Nielsen, Liza Rosenbaum, Nielsen, Søren Saxmose & Houe, Hans, Jul 2016, The 29th World Buiatrics Congress, Dublin 2016 - Congress Proceedings. Doherty, M. (ed.). Veterinary Ireland, p. 478 P04-004-051

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

  46. Published

    Systematic hybrid LOH: a new method to reduce false positives and negatives during screening of yeast gene deletion libraries

    Alvaro, D., Sunjevaric, I., Reid, R. J., Lisby, Michael, Stillman, D. J. & Rothstein, R., 2006, In: Yeast. 23, 14-15, p. 1097-1106

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Systematic identification and stratification of help-seeking school-aged youth with mental health problems: a novel approach to stage-based stepped-care

    Wolf, R. T., Puggaard, L. B., Pedersen, M. M. A., Pagsberg, Anne Katrine, Silverman, W. K., Correll, C. U., Plessen, K. J., Neumer, S. P., Gyrd-Hansen, D., Thastum, M., Bilenberg, N., Thomsen, P. H. & Jeppesen, Pia, 2022, In: European Child and Adolescent Psychiatry. 31, p. 781–793

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Systematic identification of feature combinations for predicting drug response with Bayesian multi-view multi-task linear regression

    Ammad-Ud-Din, M., Khan, S. A., Wennerberg, Krister & Aittokallio, T., 15 Jul 2017, In: Bioinformatics (Online). 33, 14, p. i359-i368

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

    Pauli, A., Valen, E., Lin, M. F., Garber, M., Vastenhouw, N. L., Levin, J. Z., Fan, L., Sandelin, Albin Gustav, Rinn, J. L., Regev, A. & Schier, A. F., 2012, In: Genome Research. 22, p. 577-591 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Systematic identification of proteins that elicit drug side effects

    Kuhn, M., Al Banchaabouchi, M., Campillos, M., Jensen, Lars Juhl, Gross, C., Gavin, A. & Bork, P., 30 Apr 2013, In: Molecular Systems Biology. 9, p. 663 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review